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View Structure Prediction Details

Protein: WHY3_ARATH
Organism: Arabidopsis thaliana
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WHY3_ARATH.

Description E-value Query
Range
Subject
Range
gi|110740230 - gi|110740230|dbj|BAF02013.1| hypothetical protein [Arabidopsis thaliana]
498.0 [0..1] [268..1]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLLSSPPM AVFSKTFINH KFSDARFLSS HSILTSGGFA GKIIPLKPTA RLKLTVKSRQ  60
   61 SDYFEKQRFG DSSSSQNAEV SSPRFYVGHS IYKGKAALTI EPRAPEFVAL ESGAFKLTKE 120
  121 GFLLLQFAPA AGVRQYDWSR KQVFSLSVTE IGNLVSLGPR ESCEFFHDPF KGKGSDEGKV 180
  181 RKVLKVEPLP DGSGRFFNLS VQNKLLNVDE SVYIPITKAE FAVLISAFNF VLPHLIGWSA 240
  241 FANSIKPEDS NRLNNASPKY GGDYEWSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1l3aA
Description: Plant transcriptional regulator PBF-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle