YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30681419, gi|...
Organism: Arabidopsis thaliana
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30681419, gi|....

Description E-value Query
Range
Subject
Range
gi|74001062 - gi|74001062|ref|XP_544799.2| PREDICTED: similar to chromatin modifying protein 2B [Canis familiaris]
182.0 [0..1] [228..581]

Back

Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVFGAKKN TEPPPSIQDA SDRINKRGDS VEDKIKKLDV ELCKYKEQLK KTRPGPAQEA  60
   61 VKARAMRVLK QKKMYEGQRD MLYNQTFNLD QVSFAAEGLK DAQQTMTALK SANKELKGMM 120
  121 KTVKIQDIDN LQDEMMDLMD VSSEIQESLG RSYNIPDGLD EDDLMGELDA LEADMGNETE 180
  181 ADGMPSYLQP DTETDYDSEL NLPAAPTGHN GAPHGRAQAE DEFGLPAVPR ASLRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 2gd5A
Description: No description for 2gd5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle