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View Structure Prediction Details

Protein: NAC72_ARATH
Organism: Arabidopsis thaliana
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC72_ARATH.

Description E-value Query
Range
Subject
Range
gi|4972066, gi|7... - pir||T08933 hypothetical protein F27G19.10 - Arabidopsis thaliana, gi|7269595|emb|CAB81391.1| putati...
395.0 [0..1] [297..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVREKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGYH FSLQVIGDID LYKFDPWDLP  60
   61 SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITADGRR VGIKKALVFY 120
  121 AGKAPKGTKT NWIMHEYRLI EHSRSHGSSK LDDWVLCRIY KKTSGSQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [169-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAVTPVQACR EEHSTNGSSS SSSSQLDDVL DSFPEIKDQS FNLPRMNSLR TILNGNFDWA  60
   61 SLAGLNPIPE LAPTNGLPSY GGYDAFRAAE GEAESGHVNR QQNSSGLTQS FGYSSSGFGV 120
  121 SGQTFEFRQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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