YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DRE2_ARATH
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593933, gi|... - gi|30686798|ref|NP_850844.1| unknown protein [Arabidopsis thaliana], gi|21593933|gb|AAM65895.1| unkn...
342.0 [0..4] [272..1]

Back

Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSMMNQKTV LAVTDDVVLP VSSVLAIMKE LGKEVIESFD PLIITQASTI NQFPLDASSV  60
   61 EAVLAISKTS DFPSDKICGE FSRILKP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.94
Match: 2yqzA
Description: No description for 2yqzA was found.

Predicted Domain #2
Region A:
Residues: [88-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGTVSVCKVL EGETGEIQQT IQRRVTLAGF LEPQCLDLKS IKLSTFSLSF GIKAKKPSWK  60
   61 IGSSFALKKP VTNLFKIDLD DDVDLIDEDS LLTEEDLMKP QLPVASGCET TKKACKNCVC 120
  121 GRAEIEEKAV KLGLTEDQIE NPQSSCGSCG LGDAFRCGTC PYKGLPPFKL GEKVTLSQNF 180
  181 LEADI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 40.920819
Match: PF05093.4
Description: No description for PF05093.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle