| Protein: | gi|15241057, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241057, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
380.0 | [0..1] | [300..1] |
|
|
322.0 | [0..26] | [285..27] |
|
|
258.0 | [0..13] | [196..5] |
|
|
254.0 | [0..14] | [196..23] |
|
|
253.0 | [0..13] | [196..5] |
|
|
252.0 | [0..14] | [196..6] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MGRCLTKKVF LIQSPILFLH LLISLSSGAV KPDLKGVCVS KGGRFPPYEL EGKPPKSVGR 60
61 GSKDLTLCRV FRKKTCCSSV QTNPAFVAVR NLATYGEASQ ECLELFELLE CSICNPNVGI 120
121 QPGPPRICAS FCDRVFEACK DAYFASNALK RVIGPCGVND DIICIKASNW ESNGTSFCEA 180
181 AGFAVQRNDD SREKPCY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [198-300] |
1 11 21 31 41 51
| | | | | |
1 GSKASLESVV ESWSRDSRKE TPLKTETLSC FKDLLQWVRE MTTIQKISLG MSFLIAGMFL 60
61 IRQSNNRNQK QRLAAIQRTA RRLRGNGNGD SYSAAINRRT SSD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.921 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.919 | a.7.14 | Description not found. |
| View | Download | 0.896 | a.29.8 | Description not found. |
| View | Download | 0.870 | a.29.12 | Description not found. |
| View | Download | 0.853 | a.7.14 | Description not found. |
| View | Download | 0.842 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.768 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.760 | a.74.1 | Cyclin-like |
| View | Download | 0.760 | a.74.1 | Cyclin-like |
| View | Download | 0.740 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.719 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.528 | a.74.1 | Cyclin-like |
| View | Download | 0.509 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.484 | a.74.1 | Cyclin-like |
| View | Download | 0.471 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
