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View Structure Prediction Details

Protein: DET1_ARATH
Organism: Arabidopsis thaliana
Length: 543 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DET1_ARATH.

Description E-value Query
Range
Subject
Range
DET1_ARATH - Light-mediated development protein DET1 - Arabidopsis thaliana (Mouse-ear cress)
830.0 [0..1] [543..1]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTSGNVTAR VFERQIRTPP PGASVNRARH FYENLVPSYT LYDVESPDHC FRKFTEDGLF  60
   61 LISFSRNHQE LIVYRPSWLT YSTTDDSTTT LPPLPRRASK FDSFFTQLYS VNLASSNELI 120
  121 CKDFFLYHQT RRFGLFATST AQIHDSSSPS NDAVPGVPSI DKITFVLLRL DDGVVL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DERVFLHDFV NLAHNMGVFL YDDLLAILSL RYQRIHLLQI RDSGHLVDAR AIGYFCREDD  60
   61 ELFLNSSSQA MMSQDKSKQQ SLSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [261-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKEDDTGENG LRHSLSQPSG SNSFLSGVKQ RLLSFIFREI WNEESDNVMR VQSLKKKFYF  60
   61 HFQDYVDLII WKVQFLD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [338-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQHLLIKFGS VDGGVTRSAD HHPAFFAVYN METTDIVAFY QNSAEDLYQL FEQFSDHFTV  60
   61 SSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [401-543]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPFMNFVTSH SNNVYALEQL KYTKNKSNSF SQFVKKMLLS LPFSCQSQSP SPYFDQSLFR  60
   61 FDEKLISAAD RHRQSSDNPI KFISRRQPQT LKFKIKPGPE CGTADGRSKK ICSFLFHPHL 120
  121 PLAISIQQTL FMPPSVVNIH FRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle