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View Structure Prediction Details

Protein: GRF2_ARATH
Organism: Arabidopsis thaliana
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRF2_ARATH.

Description E-value Query
Range
Subject
Range
gi|7487502, gi|4... - pir||T06021 hypothetical protein T28I19.20 - Arabidopsis thaliana, gi|7270757|emb|CAB80439.1| putati...
681.0 [0..1] [535..1]
gi|51039843 - gi|51039843|tpg|DAA05211.1| TPA: TPA_exp: growth-regulating factor 7 [Oryza sativa (japonica cultiva...
385.0 [0..99] [503..44]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS  60
   61 SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS DKPDALDFSK YVGLDNSSNN 120
  121 KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTGVKGPFTL TQWAELEQQA LIYKYITANV PVPSSLLISI KKSFYPYGSL PPSSFGWGTF  60
   61 HLGFAGGNMD PEPGRCRRTD GKKWRCSRDA VPDQKYCERH INRGRHRSRK PVEVQSGQN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTAAAASKAV TTPQQPVVAG NTNRSNARAS SNRSLAIGSQ YINPSTESLP NNRGVSIYPS  60
   61 TVNLQPKESP VIHQKHRNNN NPFEFGHISS DSLLNPNTAK TYGSSFLDFS SNQEKHSGNH 120
  121 NHNSWPEELT SDWTQLSMSI PIASSSPSST HNNNNAQEKT TLSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [441-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG  60
   61 VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle