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View Structure Prediction Details

Protein: AHL1_ARATH
Organism: Arabidopsis thaliana
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHL1_ARATH.

Description E-value Query
Range
Subject
Range
gi|7267909, gi|4... - pir||T06615 hypothetical protein F16J13.150 - Arabidopsis thaliana, gi|7267909|emb|CAB78251.1| putat...
331.0 [0..5] [356..1]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH  60
   61 TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP DGTVVALSPK PISSAPAPSH 120
  121 LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.13
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [167-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGNFTPHIIT VNTGEDVTMK IISFSQQGPR SICVLSANGV ISSVTLRQPD SSGGTLTYEG  60
   61 RFEILSLSGS FMPNDSGGTR SRTGGMSVSL ASPDGRVVGG GLAGLLVAAS PVQVVVGSFL 120
  121 AGTDHQDQKP KKNKHDFMLS SPTAAIPISS AADHRTIHSV SSLPVNNNTW QTSLASDPRN 180
  181 KHTDINVNVT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 2nmuA
Description: No description for 2nmuA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.210430303475354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle