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View Structure Prediction Details

Protein: DTX12_ARATH
Organism: Arabidopsis thaliana
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX12_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
327.0 [0..22] [480..633]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDAESTKDR LLLPVERVEN VTWSDLRDGS FTVELKRLIF FAAPMAAVVI AQFMLQIVSM  60
   61 MMVGHLGNLS LASASLASSF CNVTGFSFII GLSCALDTLS GQAYGAKLYR KLGVQTYTAM 120
  121 FCLALVCLPL SLIWFNMEKL LLILGQDPSI AHEAGKYATW LIPGLFAYAV LQPLTRYFQN 180
  181 QSLITPLLIT SYVVFCIHVP LCWFLVYNSG LGNLGGALAI SLSNWLYAIF LGSFMYYSSA 240
  241 CSETR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.958607
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [246-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APLSMEIFDG IGEFFKYALP SAAMICLEWW SYELIILLSG LLPNPQLETS VLSVCLQTIS  60
   61 TMYSIPLAIA AAASTRISNE LGAGNSRAAH IVVYAAMSLA VIDALIVSMS LLIGRNLFGH 120
  121 IFSSDKETID YVAKMAPLVS ISLMLDALQG VLSGIARGCG WQHIGAYINL GAFYLWGIPI 180
  181 AASLAFWIHL KGVGLWIGIQ AGAVLQTLLL ALVTGCTNWE SQADKARNRM ALAYGT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.920819
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle