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View Structure Prediction Details

Protein: gi|7363286, gi|1...
Organism: Oryza sativa Japonica Group
Length: 734 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7363286, gi|1....

Description E-value Query
Range
Subject
Range
gi|54695180 - gi|54695180|dbj|BAD67155.1| PPR986-12 [Physcomitrella patens]
776.0 [0..1] [734..257]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCSVAATAS LLPSPPPKPT ALAADDHHAR LRAAAARSDL PAALAAFVAM SSAGAPPVLR  60
   61 TFTSLLKLCA ARGDLATGRA VHAQLAARGI DSEALAATAL ANMYAKCRRP ADARRVFDRM 120
  121 PVRDRVAWNA LVAGYARNGL ARMAMEMVVR MQEEEGERPD SITLVSVLPA CANARALAAC 180
  181 REAHAFAIRS GLEELVNVAT AILDAYCKCG DIRAARVVFD WMPT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.19
Match: 2q7fA
Description: No description for 2q7fA was found.

Predicted Domain #2
Region A:
Residues: [225-734]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNSVSWNAMI DGYAQNGDSR EALALFNRMV EEGVDVTDVS VLAALQACGE LGCLDEGMRV  60
   61 HELLVRIGLD SNVSVMNALI TMYSKCKRVD LASHVFDELD RRTQVSWNAM ILGCAQNGCS 120
  121 EDAVRLFTRM QLENVKPDSF TLVSVIPALA DISDPLQARW IHGYSIRLHL DQDVYVLTAL 180
  181 IDMYAKCGRV NIARILFNSA RERHVITWNA MIHGYGSHGF GKAAVELFEE MKSIGIVPNE 240
  241 TTFLSVLSAC SHAGLVDEGR EYFTSMKEDY GLEPGMEHYG TMVDLLGRAG KLDEAWAFIQ 300
  301 KMPMDPGLSV YGAMLGACKL HKNVELAEES AQKIFELGPQ EGVYHVLLAN IYANASMWKD 360
  361 VARVRTAMEK NGLQKTPGWS IIQLKNEIHT FYSGSTNHQQ AKEIYSRLAK LIEEIKAVGY 420
  421 VPDTDSIHDV EDDVKAQLLN THSEKLAIAF GLIRTAPGTT IQIKKNLRVC NDCHNATKLI 480
  481 SLVTGREIIM RDIQRFHHFK DGKCSCGDYW 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle