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View Structure Prediction Details

Protein: ADSL3_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADSL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|149040241, gi... - gi|7229071|dbj|BAA92436.1| stearoyl-CoA desaturase 2 [Rattus norvegicus], gi|149040241|gb|EDL94279.1...
357.0 [0..8] [292..55]
ACOD1_MOUSE - Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=1 SV=2
355.0 [0..8] [292..52]
gi|47523282, gi|... - gi|47523282|ref|NP_998946.1| stearoyl-CoA desaturase [Sus scrofa], gi|40549310|gb|AAR87714.1| stearo...
355.0 [0..8] [292..56]
gi|12698736 - gi|12698736|gb|AAK01666.1| stearoyl-CoA desaturase [Capra hircus]
355.0 [0..8] [292..56]
ACOD_MESAU - Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1
354.0 [0..8] [292..51]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDKNKDDSS SQSKAVRKEK RAFLFRKWTR VDVMRVSAVG AVHLLCLLAP FNYTWEAFRF  60
   61 AAMVGISTNL SITFSYHRNL THRSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPKWLEYPF AYSALFALQG HPIDWVSTHR FHHQFTDSDR DPHSPIEGFW FSHVFWIFDT  60
   61 SYIREKCGGR DNVMDLKQQW FYRFLQNTIG LHILTFWILV YLWGGLPYLT WSVGVGGAIG 120
  121 YHATWLINSA CHIWGSRAWN TKDTSRNIWW LGPFTMG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [243-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESWHNNHHAF EASARHGLEW YQVDLTWYLI WFFQVLGLAT DVKLPTDAQK RKMSLAR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.409 N/A N/A a.159.5 Description not found.
View Download 0.372 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.371 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.315 N/A N/A a.60.1 SAM/Pointed domain
View Download 0.315 N/A N/A a.60.1 SAM/Pointed domain
View Download 0.307 N/A N/A a.60.1 SAM/Pointed domain
View Download 0.301 N/A N/A a.159.2 FF domain
View Download 0.290 N/A N/A a.60.1 SAM/Pointed domain
View Download 0.273 N/A N/A a.4.10 N-terminal Zn binding domain of HIV integrase
View Download 0.272 N/A N/A a.60.1 SAM/Pointed domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle