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View Structure Prediction Details

Protein: DTX6_ARATH
Organism: Arabidopsis thaliana
Length: 483 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX6_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
329.0 [0..20] [479..635]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDPLLLGDN QIITGSLKPT PTWRMNFTAE LKNLSRMALP MATVTVAQYL LPVISVMVAG  60
   61 HRSELQLSGV ALATSFTNVS GFSVMFGLAG ALETLCGQAY GAKQYAKIGT YTFSAIVSNV 120
  121 PIVVLISILW FYMDKLFVSL GQDPDISKVA GSYAVCLIPA LLAQAVQQPL TRFLQTQGLV 180
  181 LPLLYCAITT LLFHIPVCLI LVYAFGLGSN GAALAIGLSY WFNVLILALY VRFSSSCEKT 240
  241 RGFVSDDFVL SVKQFFQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.721246
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [258-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGIPSAAMTT IEWSLFEFLI LSSGLLPNPK LETSVLSICL TTSSLHYVIP MGIGAAGSIR  60
   61 VSNELGAGNP EVARLAVFAG IFLWFLEATI CSTLLFICRD IFGYAFSNSK EVVDYVTELS 120
  121 PLLCISFLVD GFSAVLGGVA RGSGWQHIGA WANVVAYYLL GAPVGLFLGF WCHMNGKGLW 180
  181 IGVVVGSTAQ GIILAIVTAC MSWNEQAAKA RQRIVVRTSS FGNGLA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.79588
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle