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View Structure Prediction Details

Protein: gi|18396033, gi|...
Organism: Arabidopsis thaliana
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18396033, gi|....

Description E-value Query
Range
Subject
Range
gi|21536656 - gi|21536656|gb|AAM60988.1| unknown [Arabidopsis thaliana]
160.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRLTSLKR AAVESCRILE TRSLSHVAAM PSPLNGAFDR PISMPPLVLP EFDQNQPGLI  60
   61 EEKSFGFGLP SFAFNGSMEL MAVPKKKISK HKRGIRNGPK ALKPVPVIIR CRSCGRVKLP 120
  121 HFFCCSGERL NPTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1vs60
Description: No description for 1vs60 was found.

Predicted functions:

Term Confidence Notes
structural molecule activity 0.79464321066733 bayes_pls_golite062009
structural constituent of ribosome 0.78588254262793 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle