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View Structure Prediction Details

Protein: AZG2_ARATH
Organism: Arabidopsis thaliana
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AZG2_ARATH.

Description E-value Query
Range
Subject
Range
gi|9759032 - gi|9759032|dbj|BAB09401.1| transmembrane transport protein-like [Arabidopsis thaliana]
278.0 [0..1] [530..18]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGREKTLCKS WSDMKKHLND TVSKSFIGRF FKLEARKTTF TTELRAATAT FLTMAYIITV  60
   61 NANILADSGA TCSINDCSTV ASSSPPGPEC VLGSNPGYEQ CISRVKKDLV VATSLSAMVG 120
  121 SLAMGLLANL PFGLAPGMGA NAYIAYNVVG FRGSGSISYH TAMAIVLLEG CAFLAVSALG 180
  181 LRGKLARLIP QTVRLACAVG IGMFIAFVGL QMNQGIGLVG PDKSTLVTLT ACAETDPVTG 240
  241 ACLGGKMKSP TFWLAVVGFL ITSFGLMKN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [270-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKGSMIYGIV FVTAISWIRG TQVTIFPHTP LGDSNYNYFT KIVDFHKIQS TLGAISFTEF  60
   61 RKSEVWVAFA TLFYVDLLGT TGVLYTMAEI GGFVEDGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [368-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FEGEYAAYLV DAGSSVVGSA LGVTTTATFV ESSAGLKEGG KTGLTAVIVG LYFLASMFFT  60
   61 PLVTNVPRWA VGPSLVMVGV MMMGVVKDIR WGETKEAVTA FVTILLMPLT YSIANGIIAG 120
  121 IGIYLALSMY DVVLGVAKWL NGVRKRVMRE HNQVSSVATV EIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle