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View Structure Prediction Details

Protein: gi|18491163, gi|...
Organism: Arabidopsis thaliana
Length: 536 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18491163, gi|....

Description E-value Query
Range
Subject
Range
gi|26983824, gi|... - gi|30693304|ref|NP_174855.2| adenylosuccinate lyase, putative / adenylosuccinase, putative [Arabidop...
443.0 [0..1] [536..1]

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Predicted Domain #1
Region A:
Residues: [1-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNFSSMAI THPKIPSFGF TPTGIFLNPS KSVCLASHHR LPRVSCSVST TTDSPKLVTS  60
   61 TKVTAMDGVS SRDLEMSNLT ALSPLDGRYW SKVKDLASSL SEFGLIYFRV FVEIKWLLKL 120
  121 SNIPEVTEVP SFSKEAQSFL QGIIDGFSID DALEIKKIER VTNHDVKAVE YFLKQKCESQ 180
  181 PEIAKVLEFF HFACTSEDIN NLSHALMLQE ALSSVILPTM DELIKSISLI AKNFAYVPML 240
  241 SRTHGQPATP TTLGKEMANF AVRLSEERRY LSETKIKGKF AGAVGNYNAH ISAYSNIDWP 300
  301 HVSEEFVTSL GLTFNPYVTQ IEPHDYMARL FNNISQFNTI LIDFDRDIWS YISLGYFKQT 360
  361 TKAGEIGSST MPHKVNPIDF ENSEGNLGKA NAELTFLSMK LPISRMQRDL TDSTVLRNMG 420
  421 GALGHSLLAY KSAIQGIGKL QVNEARLKED LDDNWEVLAE PIQTVMRRYG VPEPYEKLKE 480
  481 LTRGKAVNEE TIRTFIKGLE LPSEAKDQLL ELTPHTYVGA AAALALAVDE ALHLGH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 2ptsA
Description: No description for 2ptsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle