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View Structure Prediction Details

Protein: ARP6_ARATH
Organism: Arabidopsis thaliana
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP6_ARATH.

Description E-value Query
Range
Subject
Range
gi|109489498 - gi|109489498|ref|XP_001076100.1| PREDICTED: similar to Actin, cytoplasmic 2 (Gamma-actin) [Rattus no...
554.0 [0..4] [420..316]

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Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNIVVLDNG GGLIKAGQGG ERDPTTVIPN CLYKPLSSKK FIHPSPLTTL SDEIDLTSAA  60
   61 VRRPIDRGYL INSDLQREIW SHLFTSLLHI APSSSSLLLT EAPLSIPSVQ RTTDELVFED 120
  121 FGFSSLYIAH PQSLVHLYEA SRQPDSILSK TQCSLVVDCG FSFTHAVPVL HNFTLNHAIK 180
  181 RIDLGGKAFT NYLKELVSYR SINVMDETFL VDDAKEKLCF VSLDLLRDLR LARNGNTLIK 240
  241 STYVLPDGVT HTKGYVKDPQ AAKRFLSLSE KESVVVMDKV GERKKADMNK NEIDLTNERF 300
  301 LVPETLFQPA DLGMNQAGLA ECIVRAINSC HSYLQPVLYQ SIILTGGSTL FPQLKERLEG 360
  361 ELRPLVPDHF DVKITTQEDP ILGVWRGGSL LASSPDFESM CVTKAEYEEL GSARCRRRFF 420
  421 H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 1hluA
Description: Actin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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