YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FACE1_ARATH
Organism: Arabidopsis thaliana
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FACE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|46123047, gi|... - gi|46123047|ref|XP_386077.1| hypothetical protein FG05901.1 [Gibberella zeae PH-1], gi|42552703|gb|E...
393.0 [0..4] [416..421]

Back

Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIPFMETVV GFMIVMYIFE TYLDLRQLTA LKLPTLPKTL VGVISQEKFE KSRAYSLDKS  60
   61 YFHFVHEFVT ILMDSAILFF GILPWFWKMS GAVLPRLGLD PENEILHTLS FLAGVMTWSQ 120
  121 ITDLPFSLYS TFVIESRHGF NKQTIWMFIR DMIKGTFLSV ILGPPIVAAI IFIVQKGGPY 180
  181 LAIYLWAFMF ILSLVMMTIY PVLIAPLFNK FTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [214-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPDGDLREKI EKLASSLKFP LKKLFVVDGS TRSSHSNAYM YGFFKNKRIV LYDTLIQQCK  60
   61 NEDEIVAVIA HELGHWKLNH TTYSFIAVQI LAFLQFGGYT LVRNSTDLFR SFGFDTQPVL 120
  121 IGLIIFQHTV IPLQHLVSFG LNLVSRAFEF QADAFAVKLG YAKDLRPALV KLQEENLSAM 180
  181 NTDPLYSAYH YSHPPLVERL RAIDGEDKKT D

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 64.455932
Match: PF01435.9
Description: No description for PF01435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle