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View Structure Prediction Details

Protein: FBX14_ARATH
Organism: Arabidopsis thaliana
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBX14_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
274.0 [0..80] [621..49]

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Predicted Domain #1
Region A:
Residues: [1-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE  60
   61 NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS LSPARLIHRF KRVRSLVLKG 120
  121 KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL 180
  181 TLVCCEGFGT SGIAIVANKC RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE 240
  241 SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ 300
  301 QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC 360
  361 HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED SEGPVSGVGL QAISEGCRKL 420
  421 ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL 480
  481 TRLAVSGLLT DEAFSYIGEY GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG 540
  541 DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV 600
  601 ETLYLYRSLD GPRKDAPKFV TIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle