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View Structure Prediction Details

Protein: AAPT2_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AAPT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|7488522, gi|2... - pir||T14412 ethanolaminephosphotransferase homolog - turnip, gi|2072356|gb|AAB53764.1| aminoalcohol...
gi|2072356|gb|AA... - aminoalcoholphosphotransferase [Brassica rapa]
298.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYIGAHGVA ALKKHKYSGV DHSYLAKYVL QPFWNRFVKI FPLWMPPNMI TLMGFMFLLT  60
   61 SALLGYIYSP KLDSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPRWVHFAHG LLLFLYQTFD AVDGKQARRT NSSSPLGELF DHGCDALGCA LETMAYGSTA  60
   61 MCGRDTFWFW VISAVPFFGA TWEHYFTNTL TLPVVNGPTE GLALIYCGHF FTAIVGAEWW 120
  121 AQPFGKSIPL FSWVPFLNEM QMSRIILFSM IF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.207608
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [228-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FAVIPTLAIN TSNVYKVVHS RNGSMLLALA MLYPLVTLIA GVLIWDYLSP IDLIRNYPHL  60
   61 VVLGTGLAFG FLVGRMILAH LCDEPKGLKT NMCMSLLYLP FALANALTAR LNDGVPLVDE 120
  121 FWVLLGYCIF TLSLYAHFAT SVIHEITTAL GIYCFRITRK EA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle