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View Structure Prediction Details

Protein: gi|13878031, gi|...
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13878031, gi|....

Description E-value Query
Range
Subject
Range
gi|21593613 - gi|21593613|gb|AAM65580.1| unknown [Arabidopsis thaliana]
256.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHTLSLLPF LFIIIISSFH VLPVSPTPSH KLKSATTIRK LNRGGPYIGL VTVIATEENA  60
   61 FLRSVDFRPD PTHPFLDLSG RRFRIGKIHG KKVVYVRCGR GMVNGAAATQ QMIDVFNVKG 120
  121 IVHFGIAGNM NNSMSIGDVS IPKQITNAGL WDWLNPDKVK GVEDIAYLDV GNYNVPKGDG 180
  181 DNELGSIGYN YEQLYSVTGH INAPQNVFWI NTTQEWLHLA ADLEKMELSQ CVNASLCLPK 240
  241 KPKLVVGLKA ATAYIFVDNA AYRNFLYDTF GVSSSDMESS AVAMTCASNG YPIIVIRGLS 300
  301 DLAGEGGDNT VHKFGSLAAT NTAKAVLEFI RKLPPY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.221849
Match: 1zosA
Description: No description for 1zosA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle