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View Structure Prediction Details

Protein: PPA24_ARATH
Organism: Arabidopsis thaliana
Length: 615 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPA24_ARATH.

Description E-value Query
Range
Subject
Range
gi|56788341 - gi|56788341|gb|AAW29949.1| putative purple acid phosphatase [Arabidopsis thaliana]
557.0 [0..1] [615..1]
gi|115489244, gi... - gi|115489244|ref|NP_001067109.1| Os12g0576600 [Oryza sativa (japonica cultivar-group)], gi|113649616...
528.0 [0..3] [614..1]
gi|52353232 - gi|52353232|emb|CAD12839.3| putative metallophosphatase [Lupinus luteus]
524.0 [0..4] [614..14]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVLGVLLC LLALFSSSLC LDHANGRGDQ ALAQINVYET SLALDSSVKL HASPQVLGSQ  60
   61 GE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTEWVNLAIS NPKPTSDDWI GVFSPAKFDS GNCWPTSGGK EKTPYICSSP IKYMYCNSHP  60
   61 DYMKSGNVTL KFQIINQRAD VSFALFSNGV QEPHLLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [160-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSNPVAFFNP KAPVYPRLAL GKNWDEMTVT WTSGYNIDEA VPFIEWSAKG LPARRSPAGT  60
   61 LTFNRNSMCG NPARGVGWRD PGFFHTSFLK ELWPNREYIY RLGHDLVNGS TIWSKNYTFV 120
  121 SSPYPGQDSK QRVIIFGDMG KGERDGSNEY NDYQPGSLNT TDQVIKDLKD IDIVFHIGDL 180
  181 TYSNGYLSQW DQFTAQVQPI ASTVPYMIAS GNHERDWPDT GSFYAGTDSG GECGVPAETM 240
  241 FYFPAENRAK FWYKTDYGMF RFCVADSEHD WREGTEQYKF IENCLATVDR KTQPWLIFIA 300
  301 HRVLGYSTND WYGKEGTFEE PMGRESLQKL WQKYKVDLAF YGHVHNYERT CPIYESQCVN 360
  361 NDKDHYSGTF KGTIHVVVGG AGSHLSPFSS LVPKWSLVRD YDFGFVKLTA SDHSSLLFEY 420
  421 KKSSTGQVYD SFNISRDYRD VLACTHDSCE PTTSAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 1kbpA
Description: Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle