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View Structure Prediction Details

Protein: KN12B_ARATH
Organism: Arabidopsis thaliana
Length: 1313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for KN12B_ARATH.

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL  60
   61 KSPLPPRPPS SNPLKRKLIA EATADNGVAI G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSDSGVKVIV RMKPPSKGEE EEMIVKKISN DALTINEQTF TFDSIADPES TQDEIFQLVG  60
   61 APLVENCLAG FNSSVFAYGQ TGSGKTYTMW GPANGLLEEH LSGDQRGLTP RVFELLFARL 120
  121 SEEQAKHAER QLKYQCRCSF LEIYNEQITD LLDPSLKNLM IREDVKSGVY VENLTEEYVK 180
  181 NLKDLSKLLV KGLANRRTGA TSVNAESSRS HCVFTCVVES HCKSVADGLS SFKTSRINLV 240
  241 DLAGSERQKL TGAAGDRLKE AGNINRSLSQ LGNLINILAE ISQTGKQRHI PYRDSRLTFL 300
  301 LQESLGGNAK LAMVCAVSPS QSCRSETFST LRFAQRAKAI QNKAIVNEVM QDDVNFLRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 3b6uA
Description: No description for 3b6uA was found.

Predicted Domain #3
Region A:
Residues: [451-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS LPNGDDDGDT  60
   61 EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT 120
  121 DVNMEDACCQ TENN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [585-1313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSETDNALTV AETMDDGSSV QPDSITNSLH SCISDTNQGN SPSKAENIPS CQDLVIEADV  60
   61 SAIVSVADTS NNTEQVSVNP VSPCLSVAPV SVSPVLIPPT ESASPKIRNS RKSLRTTSMS 120
  121 TASQKDIERA NQLTPEVVEP SPAMSTEVLN LYSALSTKKS EAFPVPTRQL AASLHRGMKL 180
  181 LDSYRQSTAL RRSTFRLSYK ALECKPSTVL SKADVGVQTY PQADEIAEDN SKEVLCSRCK 240
  241 CRAECDAQEI SDTSNLQLVP IDNSEGSEKS NFQVPKAVEK VLAGSIRREM AMEEFCTKQA 300
  301 SEISQLNRLV QQYKHERECN AIIGQTREDK IVRLESLMDG VLSKDDFLDE EFASLMHEHK 360
  361 LLKDMYENHP EVLQTRIELK RVQEELESFK NFYGDMGERE VLLEEIHDLK AQLQCYTDSS 420
  421 LTSARRRGSL LKLTYACDPN QAPQLNTIPE SVDEGPEKTL EQERLRWTEA ESNWISLAEE 480
  481 LRTELDTNRL LMEKQKRELD TEKRCAEELT EAMQMAMQGH ARMIEQYADL EEKHIQLLAR 540
  541 HRRIREGIDD VKKAAARAGV KGAESRFINA LAAEISALKV QREKEVRYFR DENKSLQSQL 600
  601 RDTAEAVQAA GELLVRFKEA EEGLTFAQKR AMDAEYEASE AYKKVDKLKR KYETEISTVN 660
  661 QQHNAEPQNP IESLQASCND DAMAKYDEPS ASDGDNQWRE EFQPFYKKDE ELSKLAEPSW 720
  721 FSGYDRCNI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.221849
Match: 2dfsA
Description: No description for 2dfsA was found.

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Created and Maintained by: Michael Riffle