YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CRRS2_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRRS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593606 - gi|21593606|gb|AAM65573.1| unknown [Arabidopsis thaliana]
292.0 [0..1] [299..1]

Back

Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTKTTSLL CFLLTAVILM NPSSSSPTDN YIYAVCSPAK FSPSSGYETN LNSLLSSFVT  60
   61 STAQTRYANF TVPTGKPEPT VTVYGIYQCR GDLDPTACST CVSSAVAQVG ALCSNSYSGF 120
  121 LQMENCLIRY DNKSFLGVQD KTLILNKCGQ PMEFNDQDAL TKASDVIGSL GTGDGSYRTG 180
  181 GNGNVQGVAQ CSGDLSTSQC QDCLSDAIGR LKSDCGMAQG GYVYLSKCYA RFSVGGS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 1oahA
Description: Cytochrome c nitrite reductase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [238-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HARQTPGPNF GHEGEKGNKD DNGVGKTLAI IIGIVTLIIL LVVFLAFVGK CCRKLQDEKW  60
   61 CK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle