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View Structure Prediction Details

Protein: PUP13_ARATH
Organism: Arabidopsis thaliana
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUP13_ARATH.

Description E-value Query
Range
Subject
Range
gi|109123815 - gi|109123815|ref|XP_001113968.1| PREDICTED: similar to solute carrier family 35, member E1 [Macaca m...
150.0 [0..42] [354..321]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEEEAMLLL KEEDEGTRRT SVPTQLMKLK RTHWWILVFI SIFFLISAQA IAVLLGRFYY  60
   61 NEGGNSKWIS TLVQTCGFPI LYLPLCFLPA SHSSSSSC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFKTLVWIYL SLGFAIGLDN LLYSFGLLYL SASTYSILCS SQLAFNGVFS YYINSQKITC  60
   61 LILFSVLFLS VSAVLVSLDD DSNSPSGDSK WSYLIGCLCT VFASLIYSLQ LSLMQFSFEN 120
  121 VLKS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.13
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [223-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETFSMVLEMQ IYTSLVASCV AVIGLFASGE WMLLSVEMEE FHEGQVIYVL TLVGTAVSWQ  60
   61 LGSVGAVALI FLVSSLFSNL IGTLSLIVTP LAAIAVFHDK LTEVKMVAML IAFMGFGFYI 120
  121 YQNYLDDLKV QRAREAQAE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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