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View Structure Prediction Details

Protein: gi|21593162, gi|...
Organism: Arabidopsis thaliana
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21593162, gi|....

Description E-value Query
Range
Subject
Range
gi|218199997 - gi|218199997|gb|EEC82424.1| hypothetical protein OsI_26818 [Oryza sativa Indica Group]
gi|113611777, gi... - gi|51963534|ref|XP_506455.1| PREDICTED OSJNBa0072I06.8 gene product [Oryza sativa (japonica cultivar...
209.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTYVSALFY GFGGIVVAGV ALLVAFQEKL VYVPVLPGLS KSYPITPARL NLIYEDIWLQ  60
   61 SSDGVRLHAW FIKMFPECRG PTILFFQENA GNIAHRLEMV RIMIQKLKCN VFMLSYRGYG 120
  121 ASEGYPSQQG IIKDAQAALD HLSGRTDIDT SRIVVFGRSL GGAVGAVLTK NNPDKVSALI 180
  181 LENTFTSILD MAGVLLPFLK WFIGGSGTKS LKLLNFVVRS PWKTIDAIAE IKQPVLFLSG 240
  241 LQDEMVPPFH MKMLYAKAAA RNPQCTFVEF PSGMHMDTWL SGGEVYWKTN LQFLEKYAPE 300
  301 KRKEDTGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.39794
Match: 2bklA
Description: Structural and Mechanistic Analysis of Two Prolyl Endopeptidsases: Role of Inter-Domain Dynamics in Catalysis and Specificity
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle