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View Structure Prediction Details

Protein: gi|21592534, gi|...
Organism: Arabidopsis thaliana
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592534, gi|....

Description E-value Query
Range
Subject
Range
gi|208427033, gi... - gi|7012724|gb|AAF35186.1|AF195865_1 lipid transfer protein precursor [Gossypium hirsutum], gi|208427...
104.0 [0..1] [115..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METHVLSRIF LLVLCIYSLK TMVYGAGECG RNPPDREAIK LAPCAMAAQD TSAKVSAICC  60
   61 ARVKQMGQNP KCLCAVMLSS TARSSGAKPE ISMTIPKRCN IANRPVGYKC GAYTLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.0
Match: 1be2A
Description: LIPID TRANSFER PROTEIN COMPLEXED WITH PALMITATE, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle