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View Structure Prediction Details

Protein: gi|18415958, gi|...
Organism: Arabidopsis thaliana
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18415958, gi|....

Description E-value Query
Range
Subject
Range
gi|25354706, gi|... - gi|84778482|dbj|BAE73268.1| xylogen like protein 12 [Arabidopsis thaliana], pir||E96594 unknown prot...
106.0 [0..4] [124..9]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYFSTATSL LLLVLSVSSP YVHGASDCDT LVITLFPCLP FISIGGTADT PTASCCSSLK  60
   61 NILDTKPICL CEGLKKAPLG IKLNVTKSAT LPVACKLNAP PVSACDSLPP ASPPTANGQG 120
  121 KWNLFGLFA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1be2A
Description: LIPID TRANSFER PROTEIN COMPLEXED WITH PALMITATE, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle