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View Structure Prediction Details

Protein: MAP1D_ARATH
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAP1D_ARATH.

Description E-value Query
Range
Subject
Range
MAP1_CHICK - Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1
311.0 [0..53] [349..68]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVKSLQPR LISSFLGNNS IRSTQPLIHL FRFDLGRRHV SMQLSRTFSG LTDLLFNRRN  60
   61 EDEVIDGKRK RLRPGNVSPR RPVPGHITKP PYVDSLQAPG ISSGLEVHDK KGIECMRASG 120
  121 ILAARVRDYA GTLVKPGVTT DEIDEAVHNM IIENGAYPSP LGYGGFPKSV CTSVNECICH 180
  181 GIPDSRPLED GDIINIDVTV YLNGYHGDTS ATFFCGNVDE KAKKLVEVTK ESLDKAISIC 240
  241 GPGVEYKKIG KVIHDLADKH KYGVVRQFVG HGVGSVFHAD PVVLHFRNNE AGRMVLNQTF 300
  301 TIEPMLTIGS RNPIMWDDNW TVVTEDASLS AQFEHTILIT KDGAEILTKC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.154902
Match: 2g6pA
Description: No description for 2g6pA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle