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View Structure Prediction Details

Protein: LPXK_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPXK_ARATH.

Description E-value Query
Range
Subject
Range
LPXK_SHEB9 - Tetraacyldisaccharide 4'-kinase OS=Shewanella baltica (strain OS195) GN=lpxK PE=3 SV=1
312.0 [0..4] [392..1]

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Predicted Domain #1
Region A:
Residues: [1-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLRKVVNE IAYTRVHTNS PALHRSLVPF LTIASSLYGV ALQIRRSLYR YSLLQKHRLP  60
   61 VPVISVGNLS WGGNGKTPMV EYISQFLVDS GLTPLILTRG YAGGDEVKML ERHLRGGPVK 120
  121 IGVGANRAAT AALFLDKYGC VDSSSLRSFF DLHERAQVWT ISEKIGCIIL DDGMQHWSLS 180
  181 RDLEIVMLNG LNPWGNGHLM PHGPLREPLL ALERADVAVV HHVDLITKQS LRDIENMIQG 240
  241 FKKSIPIFYS KMVPKYLFDV KNARSHVALE ALRCASVLCV SAIGSADAFV KSIEMTGAHY 300
  301 VDRLDFSDHH LFEAEDVETM SRRAKGLEHK SNCKPIIVVT EKDYDRDPEI LKCLDSYTVL 360
  361 VLCSELQITP ILETDVDSFN YTLMKALAAK FYVSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 2v3cC
Description: No description for 2v3cC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle