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View Structure Prediction Details

Protein: TBL3_ARATH
Organism: Arabidopsis thaliana
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|110735939 - gi|110735939|dbj|BAE99944.1| hypothetical protein [Arabidopsis thaliana]
556.0 [0..1] [434..1]
gi|92870291 - gi|92870291|gb|ABE79610.1| Protein of unknown function DUF231, plant [Medicago truncatula]
492.0 [0..29] [434..22]
gi|113548269, gi... - gi|215766847|dbj|BAG99075.1| unnamed protein product [Oryza sativa Japonica Group], gi|115452395|ref...
484.0 [0..5] [434..4]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLIPNRGV GGTKIPLSII VLVLCGFMFF ILLYTERISL LSSSSSSSSS FFKLKSCPRK  60
   61 DVSSKPKEKI RKERSEILEV LDDRFEFDPE ECNVAAGKWV YNSSIEPLYT DRSCPYIDRQ 120
  121 FSCMKNGQPE TDYLRWEWQP DDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [144-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIPRFSPKLA MNKLRGKRLL FVGDSLQRSQ WESFVCLVES IIPEGEKSMK RSQKYFVFKA  60
   61 KEYNATIEFY WAPYIVESNT DIPVISDPKK RIVKVDSVKD RAKFW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [249-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGADILVFNT YVWWMSGLRM KALWGSFGNG ESGAEALDTQ VAYRLGLKTW ANWVDSTVDP  60
   61 NKTRVFFTTM SPTHTRSADW GKPNGTKCFN ETKPIKDKKF WGTGSNKQMM KVVSSVIKHM 120
  121 TTHVTVINIT QLSEYRIDAH TSVYTETGGK ILTAEQRADP MHHADCIHWC LPGLPDTWNR 180
  181 ILLAHL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 69.356547
Match: PF03005.6
Description: No description for PF03005.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle