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View Structure Prediction Details

Protein: ABAH4_ARATH
Organism: Arabidopsis thaliana
Length: 468 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABAH4_ARATH.

Description E-value Query
Range
Subject
Range
gi|57107211 - gi|57107211|ref|XP_534973.1| PREDICTED: similar to Cytochrome P450 2C19 ((R)-limonene 6-monooxygenas...
379.0 [0..8] [467..3]

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Predicted Domain #1
Region A:
Residues: [1-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEIWFLVVP ILILCLLLVR VIVSKKKKNS RGKLPPGSMG WPYLGETLQL YSQNPNVFFT  60
   61 SKQKRYGEIF KTRILGYPCV MLASPEAARF VLVTHAHMFK PTYPRSKEKL IGPSALFFHQ 120
  121 GDYHSHIRKL VQSSFYPETI RKLIPDIEHI ALSSLQSWAN MPIVSTYQEM KKFAFDVGIL 180
  181 AIFGHLESSY KEILKHNYNI VDKGYNSFPM SLPGTSYHKA LMARKQLKTI VSEIICERRE 240
  241 KRALQTDFLG HLLNFKNEKG RVLTQEQIAD NIIGVLFAAQ DTTASCLTWI LKYLHDDQKL 300
  301 LEAVKAEQKA IYEENSREKK PLTWRQTRNM PLTHKVIVES LRMASIISFT FREAVVDVEY 360
  361 KGYLIPKGWK VMPLFRNIHH NPKYFSNPEV FDPSRFEVNP KPNTFMPFGS GVHACPGNEL 420
  421 AKLQILIFLH HLVSNFRWEV KGGEKGIQYS PFPIPQNGLP ATFRRHSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 1pq2A
Description: Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle