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View Structure Prediction Details

Protein: CPPM_ARATH
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPPM_ARATH.

Description E-value Query
Range
Subject
Range
gi|18252195, gi|... - gi|21386949|gb|AAM47878.1| putative carboxyphosphonoenolpyruvate mutase [Arabidopsis thaliana], gi|1...
298.0 [0..3] [339..1]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLMAVKTT SLCCSSLNLT ASPTFRRNPR AARLVNPTAR IQTRFHRLIE EQGIVLMPGC  60
   61 YDALSAAIVQ QTGFSAGFIS GYALSASLLG KPDFGLLTPP EMAATARSVC ASAPNIPIIA 120
  121 DADTGGGNAL NIQRTVKDLI AAGAAGCFLE DQAWPKKCGH MRGKQVIPAE EHAAKIASAR 180
  181 DAIGDSDFFL VARTDVRATS AKSGLEDAIA RVNLYMEAGA DASFVEAPRD DDELKEIGKR 240
  241 TKGYRVCNMI EGGVTPLHTP DELKEMGFHL IVHPLTALYA STRALVDVLK TLKENGSTRD 300
  301 HLQKMATFEE FNSLVDLDSW FELEARYSNL RNALGTTKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 1zlpA
Description: Petal death protein PSR132 with cysteine-linked glutaraldehyde forming a thiohemiacetal adduct
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle