YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NAGS1_ARATH
Organism: Arabidopsis thaliana
Length: 609 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAGS1_ARATH.

Description E-value Query
Range
Subject
Range
NAGS2_ARATH - Probable amino-acid acetyltransferase NAGS2, chloroplastic OS=Arabidopsis thaliana GN=NAGS2 PE=2 SV=...
409.0 [0..3] [603..2]

Back

Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN  60
   61 IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI SGDVLDGPYC DLVLKDIAFL 120
  121 HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL 180
  181 SPGPSIYNIR RHGDSSRLHE TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE 240
  241 RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF 300
  301 LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL 360
  361 SPTFQNGVGF DN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 2bufA
Description: Arginine Feed-Back Inhibitable Acetylglutamate Kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetylglutamate kinase activity 3.62493177730942 bayes_pls_golite062009
phosphotransferase activity, carboxyl group as acceptor 3.23203925555954 bayes_pls_golite062009
catalytic activity 3.20382750184555 bayes_pls_golite062009
amino acid kinase activity 2.69040298093296 bayes_pls_golite062009
transferase activity 2.54481238004476 bayes_pls_golite062009
glutamate 5-kinase activity 2.08203900247141 bayes_pls_golite062009
aspartate kinase activity 2.03700691370413 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.89315414622708 bayes_pls_golite062009
kinase activity 1.84529070582231 bayes_pls_golite062009
acetyl-CoA:L-glutamate N-acetyltransferase activity 1.28280910531626 bayes_pls_golite062009
N-acetyl-gamma-glutamyl-phosphate reductase activity 0.72506602549224 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [373-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNGLWSGEQG FAIGGEERIS RLNGYLSELA AAAFVCRGGV KRVHLLDGTI SGVLLLELFK  60
   61 RD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.1
Match: 2bufA
Description: Arginine Feed-Back Inhibitable Acetylglutamate Kinase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [435-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMGTMVASDV YEGNREAKVE DLAGIRQIIK PLEESGALVR RTDEELLRAL DSFVVVEREG  60
   61 HIIACAALFP FFEEKCGEVA AIAVASDCRG QGQGDKLLDY IEKKASALGL EMLFLLTTRT 120
  121 ADWFVRRGFQ ECPIEMIPEA RRERINLSRR SKYYMKKLLP DRSGISVVRT FQYDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 2cnmA
Description: No description for 2cnmA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle