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View Structure Prediction Details

Protein: NAT4_ARATH
Organism: Arabidopsis thaliana
Length: 526 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT4_ARATH.

Description E-value Query
Range
Subject
Range
NAT6_ARATH - Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2
319.0 [0..2] [525..8]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKTDDFAP FPVKDQLPGV EFCVSSSPNW PEGIVLGFQH YIVMLGTTVI IPSILVPLMG  60
   61 GGDVEKAEVI NTVLFVSGIN TLLQSLFGSR LPVVMGASYA YLIPALYITF SYRFTYYLHP 120
  121 HLRFEETMRA IQGALIIASI SHMIMGFFGL WRILVRFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPLSAAPLVI LTGVGLLAFA FPQLARCIEI GLPALIILII LSQYLPHLFK CKRSICEQFA  60
   61 VLFTIAIVWA YAEILTAAGA YDKRPDNTQL SCRTDRSGLI SAS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [262-526]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PWVRIPYPLQ WGRPSFHGSD AFAMMAATYV AIVETTGSFI AASRFGSATH IPPSVLSRGI  60
   61 GWQGIGVLLN GLFGTATGST ALVENTGLLG LTKVGSRRVV QISAGFMIFF SIFGKFGAVL 120
  121 ASIPLPIFAA LYCVLFAYVA SAGLGLLQFC NLNSFRNKFI LGFSIFIGLS VAQYFTEYLF 180
  181 ISGRGPVHTR TSAFNVIMQV IFSSAATVGI MAAFLLDCTH SYGHASVRRD SGRHWWEKFR 240
  241 VYHTDTRTEE FYALPYNLNR FFPSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle