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View Structure Prediction Details

Protein: R18A1_ARATH
Organism: Arabidopsis thaliana
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for R18A1_ARATH.

Description E-value Query
Range
Subject
Range
gi|50728274 - gi|50728274|ref|XP_416064.1| PREDICTED: similar to ribosomal protein L18a; 60S ribosomal protein L18...
328.0 [0..6] [177..241]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIRLHQYQ VVGRALPTEK DEQPKIYRMK LWATNEVLAK SKFWYYLRRQ KKVKKSNGQM  60
   61 LAINEIFEKN PTTIKNFGIW LRYQSRTGYH NMYKEYRDTT LNGAVEQMYT EMASRHRVRF 120
  121 PCIQIIKTAT VPASLCKRES TKQFHNSKIK FPLVFRKVRP PTRKLKTTFK ANKPNLFM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 131.69897
Match: PF01775.8
Description: No description for PF01775.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle