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View Structure Prediction Details

Protein: DDL_ARATH
Organism: Arabidopsis thaliana
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DDL_ARATH.

Description E-value Query
Range
Subject
Range
Y8013_DICDI - Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE...
gi|60469299, gi|... - gi|66814164|ref|XP_641261.1| protein serine/threonine kinase [Dictyostelium discoideum AX4], gi|6046...
207.0 [0..10] [311..1194]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSSRSPSP RTKRLRRARG EKEIGRSRER EDDGREREKR NSRERDRDIG RDRDRERKGE  60
   61 GERDREVGDK RRRSGREDTE KRRRTRTDDE RYSRGRHERS TSPSDRSHRS SRRSPERAIA 120
  121 SRHDEGSNAR GGSEEPNVEE DSVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [145-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMRAVEEALA AKKKEEPSFE LSGKLAEETN RYRGITLLFN EPPEARKPSE RWRLYVFKDG  60
   61 EPLNEPLCLH RQSCYLFGRE RRIADIPTDH PSCSKQHAVI QYREMEKEKP DGMMGKQVKP 120
  121 YIMDLGSTNK TYINESPIEP QRYYELFEKD TIKFGNSSRE YVLLHENSAE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.221849
Match: 2jpeA
Description: No description for 2jpeA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle