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View Structure Prediction Details

Protein: SBT36_ARATH
Organism: Arabidopsis thaliana
Length: 778 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT36_ARATH.

Description E-value Query
Range
Subject
Range
gi|7267752, gi|4... - pir||T04190 subtilisin-like proteinase homolog T4F9.10 - Arabidopsis thaliana, gi|7267752|emb|CAB781...
578.0 [0..1] [778..1]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNYRTSIYV VLSLVIFLNV QRSFVAESSA KRKVHIVYLG EKQHDDPEFV TESHHRMLWS  60
   61 LLGSKEDAND SMVYSYRHGF SGFAAKLTES QAKKIADLPD VVHVIPDSFY KLATTRTWDY 120
  121 LGLSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [126-778]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANPKSLLHET NMGEQIIIGV IDTGVWPESE VFNDSGFGPV PSHWKGGCET GENFNSSNCN  60
   61 KKLIGAKYFI NGFLAENESF NSTNSLDFIS PRDLDGHGTH VSTIAGGSFV PNISYKGLAG 120
  121 GTVRGGAPRA HIAMYKACWY LDDDDTTTCS SADILKAMDE AMHDGVDVLS ISLGSSVPLY 180
  181 GETDIRDGIT TGAFHAVLKG ITVVCSGGNS GPDSLTVTNT APWIITVAAT TLDRSFATPL 240
  241 TLGNNKVILG QAMYTGPGLG FTSLVYPENP GNSNESFSGT CEELLFNSNR TMEGKVVLCF 300
  301 TTSPYGGAVL SAARYVKRAG GLGVIIARHP GYAIQPCLDD FPCVAVDWEL GTDILLYTRS 360
  361 SGSPVVKIQP SKTLVGQPVG TKVATFSSRG PNSIAPAILK PDIAAPGVSI LAATTNTTFS 420
  421 DQGFIMLSGT SMAAPAISGV AALLKALHRD WSPAAIRSAI VTTAWKTDPF GEQIFAEGSP 480
  481 PKLADPFDYG GGLVNPEKSA NPGLVYDMGL EDYVLYMCSV GYNETSISQL IGKTTVCSNP 540
  541 KPSVLDFNLP SITIPNLKDE VTITRTVTNV GPLNSVYRVT VEPPLGFQVT VTPETLVFNS 600
  601 TTKKVYFKVK VSTTHKTNTG YYFGSLTWSD SLHNVTIPLS VRTQILQNYY DEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

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