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View Structure Prediction Details

Protein: DTX23_ARATH
Organism: Arabidopsis thaliana
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX23_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
322.0 [0..26] [482..635]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARREGEVTE TLLKKSTENR GEDRDGLGMK EKVWRESKKL WVVAGPAIFT RFSTSGLSLI  60
   61 SQAFIGHLGS TELAAYSITL TVLLRFSNGI LLGMASALET LCGQAYGAKQ YHMLGIYLQR 120
  121 SWIVLTGCTI CLMPIYIFAG PILLALGQEE RLVRVARIIA LWVIGINISF VPSFTCQMFL 180
  181 QAQSKNKIIA YVAAVSLGVH VFLSWLLVVH FDFGIAGAMT SSLVAHWLPN IAQVLFVTCG 240
  241 GCTETWRGFS WL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.60206
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [253-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFKDLWPVFK LSVSSGGMIC LELWYNSILI LLTGNLKNAE VALNALAICI NINALEMMVA  60
   61 FGFMAAASVR VSNEIGSGNS NGAKFATMVV VSTSLSIGII FFFIFLFLRE RVSYIFTTSE 120
  121 AVATQVADLS PLLAFSILLN SIQPVLSGVA VGAGWQKYVT VVNLACYYLV GIPSGLFLGY 180
  181 VVGLQVKGVW LGMIFGIFVQ TCVLTVMTMR TDWDQQVSSS LKRLNRWVEP ESPSRNQTLQ 240
  241 NE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.958607
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle