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View Structure Prediction Details

Protein: PPT1_ARATH
Organism: Arabidopsis thaliana
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554233 - gi|21554233|gb|AAM63308.1| phosphate/phosphoenolpyruvate translocator precursor [Arabidopsis thalian...
214.0 [0..1] [408..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD  60
   61 SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNSGKLTKVL ELGLLFAMWY LFNIYFNIYN KQVLKALHAP MTVTLVQFAV GSVLITIMWV  60
   61 LNLYKRPKIS GAQLAAILPL AVVHTLGNLF TNMSLGKVSV SFTHTIKAME PFFSVLLSAM 120
  121 FLGEKPTPWV LGAIVPIVGG VALASISEVS F

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.11
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [248-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWAGFSSAMA SNLTNQSRNV LSKKVMVKKD DSLDNITLFS IITLMSLVLM APVTFFTEGI  60
   61 KFTPSYIQSA GVNVKQIYTK SLIAALCFHA YQQVSYMILA RVSPVTHSVG NCVKRVVVIV 120
  121 SSVIFFKTPV SPVNAFGTGI ALAGVFLYSR VKGIKPKPKT A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle