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View Structure Prediction Details

Protein: FBL3_ARATH
Organism: Arabidopsis thaliana
Length: 665 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
364.0 [0..24] [647..84]

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Predicted Domain #1
Region A:
Residues: [1-665]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR  60
   61 SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT LRSLDLSRSG SFSAAGLLRL 120
  121 ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT 180
  181 VSLKWCVGVG DLGVGLLAVK CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD 240
  241 DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL 300
  301 KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL 360
  361 DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW LIGQKCRLLE ELDLTDNEID 420
  421 DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ 480
  481 GCIHLETINI SYCQDITDKS LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD 540
  541 LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS 600
  601 GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL 660
  661 EEMAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.0
Match: 2a0zA
Description: The molecular structure of toll-like receptor 3 ligand binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle