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View Structure Prediction Details

Protein: EXEC1_ARATH
Organism: Arabidopsis thaliana
Length: 684 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXEC1_ARATH.

Description E-value Query
Range
Subject
Range
gi|3549665, gi|7... - gi|7452458|pir||T04980 hypothetical protein T16L1.120 - Arabidopsis thaliana, gi|7270311|emb|CAB8008...
939.0 [0..1] [654..48]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLSTPPSQ NLAFSPAASA TSSRLTPSSK RSFYPHRLPD PTALCRCSSS SGSNSSSSSS  60
   61 SDDNPRWDSA IQDVLKSAIK RFDSVLSWYA TLDNDDGEQG SENV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKIDDDWDWD RWKKHFDQVD DQDRLLSVLK SQLNRAIKRE DYEDAARLKV AIAATATNDA  60
   61 VGKVMSTFYR ALLEERYKDA VYLRDKAGAG LVGWWSGISE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [205-499]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVKDPFGLIV QITAEHGRYV ARSYNPRQLS TSAAGAPLFE IFLTLDGKGN YKKQAVYLKW  60
   61 KEIFPDVPTM PSRTLTPGRF LTSPGRKEDT GNLAVESSED EESDNSDDDS DLLEESSGFQ 120
  121 SFLRDMIPGV KVKVMKVTAP GRVDKDFISK VIEQIADEED EENDLDIEDI DVEDDTKAEI 180
  181 DEKNADIELE SVTDEIIDNN GGREIAVKFV IGDIVDRLSG NQPLKESLRS PANLESVENS 240
  241 SFYLRLEKDL NVKESKGVEG TTLVDGKGSR QSRRRIENIM GDLAKSIEKE KKISV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [500-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMLKDVGELL SLTLSQAQNR QQLSGLTKFR RIDVTPSLDP LDGLYIGAHG LYTSEVIHLK  60
   61 RKFGQWKGGK ESKKPTDIEF YEYVEAVKLT GDPYVPAGKV AFRAKIGRRY ELPHKGLIPE 120
  121 EFGVIARYKG QGRLADPGFR NPRWVDGELV ILDGKYVKGG PVVGFVYWAP EYHFVMFFNR 180
  181 LRLQA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle