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View Structure Prediction Details

Protein: SUC4_ARATH
Organism: Arabidopsis thaliana
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUC4_ARATH.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
274.0 [0..4] [509..82]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSDQDRRH RVTRNRPPIA RPSTSSSRPV VSPPRSKVSK RVLLRVASVA CGIQFGWALQ  60
   61 LSLLTPYVQE LGIPHAWASV IWLCGPLSGL FVQPLVGHSS DRCTSKYGRR RPFIVAGAVA 120
  121 ISISVMVIGH AADIGWAFGD REGKIKPRAI VAFVLGFWIL DVANNMTQGP CRALLADLTE 180
  181 NDNRRTRVAN GYFSLFMAVG NVLGYATGSY NGWYKIFTFT KTVACNVECA NLKSAFYIDV 240
  241 VFIAITTILS VSAAHEVPLA SLASEAHGQT SGTDEAFLSE IFGTFRYFPG NVWIILLVTA 300
  301 LTWIGWFPFI LFDTDWMGRE IYGGEPNIGT SYSAGVSMGA LGLMLNSVFL GITSVLMEKL 360
  361 CRKWGAGFVW GISNILMAIC FLGMIITSFV ASHLGYIGHE QPPASIVFAA VLIFTILGIP 420
  421 LAITYSVPYA LISIRIESLG LGQGLSLGVL NLAIVIPQVI VSVGSGPWDQ LFGGGNSPAL 480
  481 AVGAATGFIG GIVAILALPR TRIQKPIPLP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle