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View Structure Prediction Details

Protein: CSLG2_ARATH
Organism: Arabidopsis thaliana
Length: 722 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSLG2_ARATH.

Description E-value Query
Range
Subject
Range
gi|9622882, gi|1... - gi|9622882|gb|AAF89965.1|AF200529_1 cellulose synthase-5 [Zea mays], gi|162460565|ref|NP_001104955.1...
601.0 [0..4] [718..251]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPQRKHSTA LHTCHPCRRT IPYRIYAVFH TCGIIALMYH HVHSIVNANN TLITCLLLLS  60
   61 DIVLAF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWATTTSLRL NPIHRTEYPE KYAAKPEDFP KLDVFICTAD PYKEPPMMVV NTALSVMAYE  60
   61 YPSHKISVYV SDDGGSSLTL FALMEAAKFS KHWLPFCKNN NVQDRSPEVY FSSKSHSSSD 120
  121 EAENLKMMYE DMKSRVEHVV ESGKVETAFI ACDQFSCVFD LWTDKFTRHD HPTIIMVLQH 180
  181 NETEMMPNLI YVSREKSKVS PHHFKAGALN TLLRVSAVMT NSPIILTLDC DMYSNNPTTP 240
  241 LHALCYLSDP KINFDLGFVQ FPQKFQGVNK NDIYASELKR PFDINTVGFD GLMGPVHMGT 300
  301 GCFFNRRAFY GPPTTLILPE IETFGPNRIA DKPIKAQDIL ALAHDVAGCN YECNTNWGSK 360
  361 IGFRYGSLVE DYFTGFMLHC EGWRSIFCSP TKAAFYGDSP KCLTDVIGQQ IRWSVGLLEV 420
  421 AFSR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.51
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #3
Region A:
Residues: [491-722]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YNPLTYGIKP LSLLMSLGYC HYAFWPFWCI PLVVYGILPQ VALIHGVSVF PKASDPWFWL  60
   61 YIILFLGGYA QDLSDFLLEG GTYRKWWNDQ RMWMVRGLSS FFFGFTEFTL KTLNLSTQGY 120
  121 NVTSKSNDDN EQMKRYEQEI FDFGPSSSMF LPITTVAIMN LLAFMRGLYG IFTWGEGPVL 180
  181 ELMLASFAVV NCLPIYEAMV LRIDDGKLPK RICFLAGLLS FVLTGSGYFF LK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle