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View Structure Prediction Details

Protein: GAUT4_ARATH
Organism: Arabidopsis thaliana
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAUT4_ARATH.

Description E-value Query
Range
Subject
Range
gi|10177914 - gi|10177914|dbj|BAB11325.1| unnamed protein product [Arabidopsis thaliana]
457.0 [0..2] [616..1]

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Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVKLRNLVL FFMLLTVVAH ILLYTDPAAS FKTPFSKRDF LEDVTALTFN SDENRLNLLP  60
   61 RESPAVLRGG LVGAVYSDKN SRRLDQLSAR VLSATDDDTH SHTDISIKQV THDAASDSHI 120
  121 NRENMHVQLT QQTSEKVDEQ PEPNAFGAKK DTGNVLMPDA QVRHLKDQLI RAKVYLSLPS 180
  181 AKANAHFVRE LRLRIKEVQR ALADASKDSD LPKTAIEKLK AMEQTLAKGK QIQDDCSTVV 240
  241 KKLRAMLHSA DEQLRVHKKQ TMFLTQLTAK TIPKGLHCLP LRLTTDYYAL NSSEQQFPNQ 300
  301 EKLEDTQLYH YALFSDNVLA TSVVVNSTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [330-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNAKHPLKHV FHIVTDRLNY AAMRMWFLDN PPGKATIQVQ NVEEFTWLNS SYSPVLKQLS  60
   61 SRSMIDYYFR AHHTNSDTNL KFRNPKYLSI LNHLRFYLPE IFPKLSKVLF LDDDIVVQKD 120
  121 LSGLWSVDLK GNVNGAVETC GESFHRFDRY LNFSNPLISK NFDPRACGWA YGMNVFDLDE 180
  181 WKRQNITEVY HRWQDLNQDR ELWKLGTLPP GLITFWRRTY PLDRKWHILG LGYNPSVNQR 240
  241 DIERAAVIHY NGNLKPWLEI GIPRYRGFWS KHVDYEHVYL RECNINP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 1g9rA
Description: Galactosyltransferase LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle