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View Structure Prediction Details

Protein: APRL5_ARATH
Organism: Arabidopsis thaliana
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APRL5_ARATH.

Description E-value Query
Range
Subject
Range
gi|6006856 - gi|6006856|gb|AAF00632.1|AC009540_9 unknown protein [Arabidopsis thaliana]
225.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRVSILFV CAIAVSCFTS GSASSPVDFS VCNYEFELFR FDLEAKCPPS LYPTPPIEVD  60
   61 GDSLDRLMAS QHGNAYMSVL FYASWCPFSR AVRPKFDMLS SMFPQIQHLA VEHSQALPSV 120
  121 FSRYGIHSLP SILMVNQTLN ARYHGRKDLI SLIEFYEEAT GLQPVQYVAE GEPTGLNAGD 180
  181 GNLITWLRKG TSIREIFKQD PFLVLSLLFI CLQMAILVFP IAESRMRALW ASYVANLNLG 240
  241 RFGEISQLFN RGIHMVDVRR LWLKLSLVKT RNFHERAKNA QAWASSLASV SLGQTSSDQS 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.045757
Match: 1a8yA
Description: CRYSTAL STRUCTURE OF CALSEQUESTRIN FROM RABBIT SKELETAL MUSCLE SARCOPLASMIC RETICULUM AT 2.4 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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