YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FZR1_ARATH
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FZR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
555.0 [0..2] [474..1255]

Back

Predicted Domain #1
Region A:
Residues: [1-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDESTTPK KKSDSQLNLP PSMNRPTVSL ESRINRLIDS NHYHSPSKPI YSDRFIPSRS  60
   61 GSNFALFDLA SSSPNKKDGK EDGAGSYASL LKTALFGPVT PEKSDVVNGF SPSGNIFRFK 120
  121 TETQRSLNLY PPFDSDVVSG VSPSPVKSPR KILRSPYKVL DAPALQDDFY LNLVDWSAQN 180
  181 VLAVGLGNCV YLWNACSSKV TKLCDLGVDE TVCSVGWALR GTHLAIGTSS GTVQIWDVLR 240
  241 CKNIRTMEGH RLRVGALAWS SSVLSSGSRD KSILQRDIRT QEDHVSKLKG HKSEICGLKW 300
  301 SSDNRELASG GNDNKLFVWN QHSTQPVLRF CEHAAAVKAI AWSPHHFGLL ASGGGT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.39794
Match: 1nexB
Description: Cdc4 F-box and linker domains; Cdc4 propeller domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [357-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADRCIRFWNT TTNTHLNCVD TNSQVCNLVW SKNVNELVST HGYSQNQIIV WKYP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 2hesX
Description: No description for 2hesX was found.

Predicted Domain #3
Region A:
Residues: [411-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TMSKLATLTG HSYRVLYLAV SPDGQTIVTG AGDETLRFWN VFPSPKSQSR ESEIGALSFG  60
   61 RTTIR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.88
Match: 1erjA
Description: Tup1, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle