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View Structure Prediction Details

Protein: gi|22330288, gi|...
Organism: Arabidopsis thaliana
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22330288, gi|....

Description E-value Query
Range
Subject
Range
gi|28564970 - gi|28564970|gb|AAO32569.1| GUP1 [Saccharomyces kluyveri]
301.0 [0..3] [528..27]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTHNNRYAK WKQRELVLIL LYAIAFYAYV VWRSLRLSHD HYFKLHGLAS GWLIPNRRND  60
   61 VSDAQWRNFR GNLPILSFVF AVFTVIANGV RSFFH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRAKGMAILW LSMSLIYLIY LHGACVIYIL SIATANFLLV KVFARTSYFP YMLWTFNIFF  60
   61 LFCNRIYEGY SFSIFGQQFE FLDNFRGTFR WHICFNFVVL RMLSFGYDYH WSQLDSHFDQ 120
  121 EKHVMRCSLC KLGKTCYVVR QERGLASDSC SFSLYLCYLV YAPLYLAGPI ISFNAFASQL 180
  181 DMPQNTLSFK DVAWYGVRWL FSFLLIELMT HLFYYNAFVI SGLWRE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [322-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSPVEIFIVG YGVLNFMWLK FLLLWRYFRF WSLVNGIETV ENMPNCINNC YSLELFWKTW  60
   61 HASFNRWLIR YMYIPLGGSR RKFLNVWVVF TFVAMWHDLE WKLLSWAWLT CLFFMPEMLL 120
  121 KSASSAYKVE SAFGEFLLRE LKALSGAVTI TCLMIANLAG YVIGPSGINW MVSSFLKREG 180
  181 VPVLGGVFFS LYVGTKLMFH IQDLRSVAHS PK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle