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View Structure Prediction Details

Protein: PREP2_ARATH
Organism: Arabidopsis thaliana
Length: 1080 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for PREP2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSLTCSST ITSTSLFFRS FRQLPRSYLS PSSSTTVVGA SGRNIRRLST LEAAGRRLFL  60
   61 RRGLKLLSAA SRGLNGQFSR LSIRAVATQS APSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-1080]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPGQDEAEKL GFEKVSEEFI SECKSKAVLF KHKKTGCEVM SVSNDDENKV FGIVFRTPPK  60
   61 DSTGIPHILE HSVLCGSRKY PMKEPFVELL KGSLHTFLNA FTYPDRTCYP VASTNKKDFY 120
  121 NLVDVYLDAV FFPKCVDDVH TFQQEGWHYE LNDPSEDISY KGVVFNEMKG VYSQPDNILG 180
  181 RVTQQALCPE NTYGVDSGGD PKDIPKLTFE KFKEFHRQYY HPSNARIWFY GDDDPVHRLR 240
  241 VLSEYLDMFD ASPARDSSKV EPQKLFSRPR RIVEKYPAGE DGDLKKKHMV CLNWLLSDKP 300
  301 LDLQTQLALG FLDHLMLGTP ASPLRKILLE SGLGEALVNS GMEDELLQPQ FSIGLKGVSD 360
  361 DNVQKVEELV MNTLRKLADE GFDTDAVEAS MNTIEFSLRE NNTGSSPRGL SLMLQSIAKW 420
  421 IYDMDPFEPL KYEEPLKSLK ARIAEKGSKS VFSPLIEEYI LNNPHCVTIE MQPDPEKASL 480
  481 EEAEEKSILE KVKASMTEED LTELARATEE LRLKQETPDP PDALKCVPSL NLSDIPKEPI 540
  541 YVPTEVGDIN GVKVLRNDLF TNNILYTEVV FDMGSVKHEL LQLIPLFCQS LLEMGTQDLT 600
  601 FVQLNQLIGR KTGGISVYPL TSSVYGRDDP CSKIIVRGKS MVGRAEDLFN LMNCVLQEVR 660
  661 FTDQQRFKQF VSQSRARMEN RLRGSGQGIA AARMDAMLNV AGWMSEQMGG LSYLEFLHTL 720
  721 EQKVDQDWEG ISSSLEEIRR SFLSRNGCIV NMTADGKSLT NTEKYVGKFL DLLPENPSGE 780
  781 LVTWDARLPL RNEAIVIPTQ VNYVGKAGNI YSSGYKLDGS SYVISKHISN TWLWDRVRVS 840
  841 GGAYGGSCDF DSHSGVFSFL SYRDPNLLKT LDIYDGTGDF LRGLDVDEDT LTKAIIGTIG 900
  901 DVDSYQLPDA KGYTSLLRHL LNVTDEERQI RREEILSTSL KDFKEFAEAI DSVSDKGVAV 960
  961 AVASQEDIDA ANRERSNFFE VKKAAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2fgeA
Description: No description for 2fgeA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle