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View Structure Prediction Details

Protein: P2C62_ARATH
Organism: Arabidopsis thaliana
Length: 724 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C62_ARATH.

Description E-value Query
Range
Subject
Range
gi|4490317, gi|7... - pir||T06001 hypothetical protein F17M5.260 - Arabidopsis thaliana, gi|7270298|emb|CAB80067.1| putati...
436.0 [0..1] [718..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS  60
   61 SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA EEKARCVEVE TQNAKIAEEA 120
  121 SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED 180
  181 KIDAKSASVS NLSSIVSVAE AIPISSTEEE AV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [213-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEKEITAKSY NVEPLSSEAM KKVSVNKIGD CETNGYQENR MEVQARPSLS TQQEITPVST  60
   61 IEIDDNLDVT EKPIEAEENL VAEPTATDDL SPDELLSTSE ATHRSVDEIA QKPVIDTSEE 120
  121 NLLNTFEAEE NPVVEPTATA AVSSDELIST SEATRHSVDE IAQKPIIDTS EKNPMETFVE 180
  181 PEAVHSSVDE STEKLV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [409-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVTSDVENDG ENVASTTEDE ITVRDTITDS GSISNNDDTK VEDLQLPVPE TASLEPIKAA  60
   61 SGREELVSKA FYLDSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [485-724]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FASLQSPFKA LAGREDAYFI SHHNWIGIAD GVSQWSFEGI NKGMYAQELM SNCEKIISNE  60
   61 TAKISDPVQV LHRSVNETKS SGSSTALIAH LDNNELHIAN IGDSGFMVIR DGTVLQNSSP 120
  121 MFHHFCFPLH ITQGCDVLKL AEVYHVNLEE GDVVIAATDG LFDNLYEKEI VSIVCGSLKQ 180
  181 SLEPQKIAEL VAAKAQEVGR SKTERTPFAD AAKEEGYNGH KGGKLDAVTV IISFVKIVST 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 2i0oA
Description: No description for 2i0oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle