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View Structure Prediction Details

Protein: WAK1_ARATH
Organism: Arabidopsis thaliana
Length: 735 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WAK1_ARATH.

Description E-value Query
Range
Subject
Range
gi|8920634, gi|2... - gi|8920634|gb|AAF81356.1|AC036104_5 Identical to wall-associated kinase 1 from Arabidopsis thaliana ...
559.0 [0..1] [735..1]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQEGLFLV AIFFSLACTQ LVKGQHQPGE NCQNKCGNIT IEYPFGISSG CYYPGNESFS  60
   61 ITCKEDRPHV LSDIEVANFN HSGQLQVLLN RSSTCYDEQG KKTEEDSSFT LENLSLSANN 120
  121 KLTAVGCNAL SLLDTFGMQN YSTACLSLCD SPPEADGECN GRGCCRVDVS APLDSYTFET 180
  181 TSGRIKHMTS FHDFSPCTYA FLVEDDKFNF SSTEDLLNLR NVMRFPVLLD WSVGNQTCEQ 240
  241 VGSTSICGGN STCLDSTPRN GYICRCNEGF DGNPYLSAGC QDVNECTTSS TIHRHNCSDP 300
  301 KTCRNKVGGF YCKCQSGYRL DT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.11
Match: 2gy5A
Description: No description for 2gy5A was found.

Predicted Domain #2
Region A:
Residues: [323-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTMSCKRKEF AWTTILLVTT IGFLVILLGV ACIQQRMKHL KDTKLREQFF EQNGGGMLTQ  60
   61 RLSGAGP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.66
Match: 1nfuB
Description: Factor X, N-terminal module
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [390-735]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNVDVKIFTE DGMKKATNGY AESRILGQGG QGTVYKGILP DNSIVAIKKA RLGDSSQVEQ  60
   61 FINEVLVLSQ INHRNVVKLL GCCLETEVPL LVYEFITNGT LFDHLHGSMI DSSLTWEHRL 120
  121 KIAIEVAGTL AYLHSSASIP IIHRDIKTAN ILLDVNLTAK VADFGASRLI PMDKEELETM 180
  181 VQGTLGYLDP EYYNTGLLNE KSDVYSFGVV LMELLSGQKA LCFKRPQSSK HLVSYFATAT 240
  241 KENRLDEIIG GEVMNEDNLK EIQEAARIAA ECTRLMGEER PRMKEVAAKL EALRVEKTKH 300
  301 KWSDQYPEEN EHLIGGHILS AQGETSSSIG YDSIKNVAIL DIETGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle